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Su, Zhixi

Su, Zhixi, Professor 

E-mail: zxsu@fudan.edu.cn

 

 

 

 

Ph. D. in Bioinformatics at Zhejiang University in 2006; Visiting Student (2004-2006), Iowa State University; Research Assistant (2006) / Associate Professor (2009) / Professor (2014) at School of Life Sciences, Fudan University; Visiting Scholar (2010-2011) at Vanderbilt University Medical Center.

 

Research Interests

Integrating the miscellaneous animal and plant genome sequences, functional genomics and epigenomics data, to study the evolution of animal and plant genomes, as well as the evolution of morphological characters. Using genomics, molecular evolution, bioinformatics and other approaches to study the potential evolutionary mechanisms underlying complex diseases, such as cancer, heart diseases.

 

Awards

Rising-Star Program)；2007年入选第一届中国百篇最具影响优秀国际学术论文 (100 most influential international academic papers in China)

 

Selected publications

  1. Sa Z, Zhou J, Zou Y*, Su Z*, Gu X*. (2017) Paralog-divergent Features May Help Reduce Off-target Effects of Drugs: Hints from Glucagon Subfamily Analysis. Genomics Proteomics Bioinformatics. pii: S1672-0229(17)30084-0. doi: 10.1016/j.gpb.2017.03.004.
  2. Zhou Z, Lyu X,Wu J, Yang X, Wu S, Zhou J, Gu X, Su Z*, Chen S*. (2017)TSNAD: an integrated software for cancer somatic mutation and tumour-specific neoantigen detection. R. Soc. open sci. 4: 170050. http://dx.doi.org/10.1098/rsos.170050
  3. Ruan H, Su Z*, Gu X*. (2016) TREEEXP1.0: R Package for Analyzing Expression Evolution Based on RNA-Seq Data. Journal of experimental Zoology Part B. 326(7):394-402.
  4. Zhou Z, Zhou J, Su Z*, Gu X*. (2014) Asymmetric Evolution of Human Transcription Factor Regulatory Networks. Molecular Biology and Evolution. 31(8):2149–2155.
  5. Gu X*, Zou Y, Huang W, Shen L, Arendsee Z, Su Z*. (2013) Phylogenomic Distance Method for Analyzing Transcriptome Evolution based on RNA-seq Data. Genome Biology and Evolution. 5(9):1746-53.
  6. Su, Z., Huang, W and Gu, X*. (2011) Comment on "Positive Selection of Tyrosine Loss in Metazoan Evolution". Science. 332(6032):917.
  7. Su, Z†., Xia, J†. and Zhao, Z*. (2011) Functional complementation between transcriptional methylation regulation and post-transcriptional microRNA regulation in the human genome.  BMC Genomics. 12(Suppl 5):S15.