2013年发表论文

Sui, P., Shi, J., Gao, X., Shen, W., Dong, A.* (2013). H3K36 methylation is involved in promoting rice flowering. Mol Plant, 6 (3): 975-7. doi: 10.1093/mp/sss152.
Jin,Y., Yang, H., Wei, Z., Ma, H., Ge, X. * (2013). Rice flower development under drought stress: phenotypic changes and stage-dependent transcriptomic reprogramming. Molecular Plant., 6:1630-45.
Wang, H., Lu, Y., Liu, P., Wen, W., Zhang, J., Ge, X. *, Xia, Y. *(2013). The ammonium/nitrate ratio is an input signal in the temperature-modulated, SNC1-mediated and EDS1-dependent autoimmunity of nudt6-2nudt7. Plant Journal, 73:262-275.
Guo, C., Ge, X.*, Ma, H.* (2013). The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant Molecular Biology, 82:239-253.
Gu, X.*, Zou, Y., Su, Z., Huang, W., Zhou, Z., Arendsee, Z., Zeng, Y. (2013) . An update of DIVERGE software for functional divergence analysis of protein family. Mol. Biol. Evol., 30: 1713-1719.
Gu, X.*, Zou, Y., Huang, W., Shen, L., Arendsee, Z., Su, Z. (2013) . Phylogenomic distance method for analyzing transcriptome evolution based on RNA-seq data. Genome Biol. Evol., 5: 1746-1753.
Huang, X.*, Ding, J., Effgen, S., Turck, F., Koornneef, M.* (2013). Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis. New Phytologist, 199:843–857.
Ju, R., Wang, F., Zhou, X. Li, B.* ( 2013) . Critical thermal tolerance to extreme high temperatures in a new invasive lace bug, Corythucha ciliata (Hemiptera: Tingidae) in subtropical China. PLoS ONE, 8: e54372.
Ju, R., Wei, H., Wang, F., Zhou, X. Li, B. (2013) . Anaerobic respiration and antioxidant responses of Corythucha ciliata (Say) adults to heat-induced oxidative stress under laboratory and field conditions. Cell Stress & Chaperones, doi: 10.1007/s12192-013-0451-x.
Li, H., Shao, J., Qiu, S. Li, B. * 2013. Native Phragmites dieback reduced its dominance in the salt marshes invaded by exotic Spartina in the Yangtze River estuary, China. Ecological Engineering, 57:236-241.
Lu, M., Zhou, X., Yang, Q., Li, H., Luo, Y., Fang, C., Chen, J., Yang, X. , Li, B. * (2013). Responses of ecosystem carbon cycle to experimental warming: a meta-analysis. Ecology, 94: 726-738.
Meng, H., Li, K., Nie, M., Wan, J., Quan, Z., Fang, C., Chen, J. Li, B. (2013). Responses of bacterial and fungal communities to an elevation gradient in a subtropical montane forest of China. Applied Microbiology and Biotechnology, 97:2219-2230.
Ma, Z., Gan, X., Choi, C. Li, B. (2013). Effects of invasive cordgrass on presence of mars grassbird in an area where it is not native. Conservation Biology, doi: 10.1111/cobi.12172.
Pan, X., Jia, X., Fu, D. Li, B. (2013a). Geographical diversification of growth-defense strategies in an invasive exotic plant. Journal of Systematcis and Evolution, 51: 308-317.
Pan, X., Weiner, J. Li, B. (2013b). Size-symmetric competition in a shade-tolerant invasive plant. Journal of Systematcis and Evolution, 51:318-325.
Sun, S., Montgomery, B. Li,B. * (2013). Contrasting effects of plant invasion on pollination of two native species with similar morphologies. Biological Invasions, 15:2165-2177.
Wan, N., Ji, X., Jiang, J., Deng, X., Huang, K. Li, B. *(2013). An eco-engineering assessment index for chemical pesticide pollution management strategies to complex agro-ecosystems. Ecological Engineering, 52:203-210.
13. Yang, Q., Carrillo, J., Jin, H., Shang, L., Hovick, S., Nijjer, S., Gabler, C., Li, B. * & Siemann E. 2013. Plant-soil biota interactions of an invasive species in its native and introduced ranges: implications for invasion success. Soil Biology & Biochemistry, 65:78-85.
15. Zhang, X., Chen, Y., Shao, J., Wu, X., Shang, L. Li, B. * (2013) . Crabs mediate interactions between native and invasive salt marsh plants: a mesocosm study. PLoS One, 8:e74095.
16. Zhou, L., Zhou, X., Zhang, B., Lu, M., Luo, Y., Liu, L. Li, B. (2013). Different responses of soil respiration and its components to nitrogen addition among biomes: A meta-analysis. Global Change Biology, (accepted)
18. 王思凯、盛强、储忝江、李博、陈家宽、吴纪华. 2013. 植物入侵对食物网的影响及其途径. 生物多样性, 21:249-259.
Liang, J., Zhou, M., Zhou, X., Jin,Y., Xu, M., Lin, J.*(2013). JcLEA, a novel LEA like-5 protein from Jatropha curcas, confers salt and drought stress tolerance in Arabidopsis. PLOS ONE, Accept.
沈忱, 周明琦, 吴丽华, 林娟* (2013)荠菜CBF途径冷诱导途径多价载体的构建和烟草的转化, 上海交通大学学报，已接收。
Sun, L., Yang,Z., Song, Z., Wang, M., Lu, S., Sun, L., and Liu, J.* (2013a). The plant-specific transcription factor NAC103 is induced by bZIP60 through a new cis-regulatory element to modulate the unfolded protein response in Arabidopsis. Plant J., 76:274-286.
Sun, L., Lu, S., Zhang, S., Zhou, S., Sun, L., and Liu, J.* (2013b). The lumen-facing domain Is important for the biological function and organelle-to-organelle movement of bZIP28 during ER Stress in Arabidopsis. Mol. Plant, 6(5):1605-1615.
Gao, J#., Sun, L#., Yang, X*. and Liu, J.* (2013).Transcriptomic analysis of cadmium stress response in the heavy metal hyperaccumulator Sedum alfredii Hance. Plos One, 8(6): e64643. (equal contribution)
Lu, B.* (2013). Introgression of transgenic crop alleles: Its evolutionary impacts on conserving genetic diversity of crop wild relatives. Journal of Systematics and Evolution, 51:245-262.
Wang, W., Xia, H., Yang, X., Xu, T., Si, H., Cai, X., Wang, F., Su, J., Snow, A., Lu, B.*(2013). A novel 5-enolpyruvoylshikimate-3-phosphate (EPSP) synthase transgene for glyphosate resistance stimulates growth and fecundity in weedy rice (Oryza sativa) without herbicide. New Phytologist, (on-line) doi: 10.1111/nph.12428.
Cai, X., Fan, J., Jiang, Z., Basso, B., Sala, F., Spada, A., Grassi, F., Lu, B. (2013). The Puzzle of Italian rice origin and evolution: Determining genetic divergence and affinity of rice germplasm from Italy and Asia. PLoS ONE, 8(11): e80351. doi:10.1371/journal.pone.0080351.
李国君, 何卓先, 王革, 柯保宁, 罗彩莲, 卢宝荣* ( 2013). 广东雷州杂草稻的发生与危害及其防治对策. 杂草科学, 31(1):20-25.
张宏彬, 夏辉, 杨箫, 卢宝荣* (2013). 种植密度对抗虫转基因杂草稻分离后代适合度的影响. 复旦学报.
卢宝荣* (2013). 以科学知识和事实增进公众对转基因生物及其安全性的了解. 植物生理学报 (Plant Physiology Journal), 49(7):615-625.
杨箫，卢宝荣* (2013). Gene flow的溯源及其在生物安全和进化研究中的意义. 生物安全学报，22(2):74-79.
Ma, H. (2013). A battle between genomes in plant male fertility. Nat. Genet, 45:472-473.
Jin, Y., Yang, H., Wei, Z., Ma, H., Ge, X.(2013). Rice flower development under drought stress: reduction of male fertility and stage-dependent transcriptomic reprogramming. Mol. Plant, 6(5):1630-1645.
Guo, C., Ge, X.*, Ma, H.* (2013). The rice OsDIL gene plays a role in drought tolerance at vegetative and reproductive stages. Plant Mol. Biol., 82:239-253.
Wang, Y., Xiao, R., Wang, H., Li, W., Cheng, Z., Wang, Y., Zhu, G., Ma, H.* (2013). The Arabidopsis RAD51 paralogs RAD51B, RAD51D, and XRCC2 play partially redundant roles in somatic DNA repair and gene expression activities. New Phytologist, DOI: 10.1111/nph.12498.
Chang, F., Zhang, Z., Jin, Y., Ma, H. (2013). Cell biological analyses of anther morphogenesis and pollen viability in Arabidopsis and rice. In Methods in Molecular Biology: Arabidopsis. Eds. Reichmann, J.L and Wellmer, F. Humana Press.
Wang, Y., Cheng, Z., Lu, P., Timofejeva, L., Ma, H. (2013). Molecular cell biology of male meiotic chromosomes and the isolation of male meiocytes in Arabidopsis thaliana. In Methods in Molecular Biology: Arabidopsis. Eds. Reichmann, J.L and Wellmer, F. Humana Press.
Wang, Y. Cheng, Z., Ma, H.*(2013). Interactions between homologous chromosomes during plant meiosis. In The Plant Sciences, Eds. Tester M and Jorgensen RA. Springer Press.
Zeng, L., Zhang, N., Ma, H. (2013). Advances and challenges in angiosperm phylogeny at order level or deeper. Biodiversity Science, (Chinese). Invited review.
Su, Z., Ma, X., Guo, H., Sukiran, L., Assmann, S.Ma, H.*(2013). Flower development under drought stress: morphological and transcriptomic analyses reveal acute responses and long-term acclimation in Arabidopsis. Plant Cell, doi: http://dx.doi.org/10.1105/tpc.113.115428.
Han, Y.,Zhang, X.,Wang, Y.,Ming, F.*(2013). The suppression of WRKY44 by GIGANTEA-miR172 pathway is involved in drought response of Arabidopsis. PLOS ONE, online publication
Han, Y., Yan, Q., Ming, F. *(2013). An Effective homologous cloning method for isolating novel miR172s from Phalaenopsis hybrida. Genetics and Molecular Biology, online publication
金津，张文政，吕波，明凤* (2013) 过表达OsAIL5基因使水稻种子在发芽过程中对高浓度硝酸盐敏感.复旦学报（自然科学版）,4(52):428-435.
李捷，陈旭，罗莉琼，于晶*，明凤*（2013）. ANAC092 参与调控花药发育的功能初探. 遗传, 35(7):913-922(封面文章).
Chen, J., Sheng, J., Lv, D., Zhong,Y., Zhang, G., Nan, P.*(2013). The Optimization of Running Time for a Maximum Common Substructure-Based Algorithm and Its Application in Drug Design. Computational Biology and Chemistry, in press.
Zhao, J., Zheng, X., Newman R.A., Zhong, Y., Nan, P.*(2013). Chemical composition and bioactivity of the essential oil of Artemisia anomala from China. The Journal of Essential Oil Researc.,Online (http://dx.doi.org/10.1080/10412905.2013.820670).
吕帝瑾, 赵佳媛, 陈婧, 钟扬, 南蓬*(2013). 植物microRNA的研究进展. 植物生理学报, 49(9):847-854.
Yao, X., Feng, H., Yu, Y., Dong, A., Shen, W.* (2013). SDG2-mediated H3K4 methylation is required for proper Arabidopsis root growth and development. PLoS One, 8(2):e56537. doi: 10.1371/journal.pone.0056537.
Molitor, A., Bu, Z., Yu, Y., Shen, W.* (2013). Arabidopsis AL PHD-PRC1 complexes promote seed germination through H3K4me3-to-H3K27me3 chromatin state switch in repression of seed developmental genes. PloS Genetics, accepted.
Zhao, Y., Vrieling, K., Liao, H., Xiao, M., Zhu, Y., Rong, J., Zhang, W., Wang, Y., Yang, J., Chen, J., Song, Z.* (2013) Are habitat fragmentation, local adaptation and isolation by distance driving population divergence in wild rice Oryza rufipogon? Mol. Ecol., 22: 5531-5547.
You, J., Liu, W., Zhao, Y., Zhu, Y., Zhang, W., Wang, Y., Lu, F., Song, Z.*(2013) Microsatellite Markers in Rhodiola (Crassulaceae), a Medicinal Herb Genus Widely Used in Traditional Chinese Medicine. Applications in Plant Sciences, 1(3) :1200219(1-3).
Wang,Y., Sun, S., Zhu, W., Jia,K., Yang, H.， and Wang X. *(2013). Strigolactone/MAX2-induceddegradation of brassinsteroid transcriptional effector BES1 regulates shoot branching. Developmental Cell,. Accepted.
Zhu, W., Wang, H., Shozo, F., Zhou, T., Tian,H., Tian,W., and Wang, X. * (2013) Homeostasis of brassinosteroids regulated by DRL1, a putative acyl-transferase in Arabidopsis. Mol Plant,. 6(2), 546-558.
Jiang, J., Zhang, C. and Wang, X. *(2013) Ligand Perception, Activation, and Early Signaling of Plant Steroid Receptor BRI1. J of Int Plant Biology, doi: 10.1111/jipb.12081. In press.
程鳞, 张弛, 蒋建军, 苏伟, 王学路*(2013). 油菜素甾醇信号通路中BKI1互作蛋白ERD7的筛选与鉴定。复旦学报，已接收。
Dong, X., Wang, X., Zhang, L., Yang, Z., Xin, X., Wu, S., Sun, C., Liu, J., Yang, J., Luo, X. *(2013). Identification and characterization of OsEBS, a gene involved in enhanced plant biomass and spikelet number in rice. Plant Biotechnology Journal, doi: 10.1111/pbi.12097.
Yang, M., Sun, F., Wang, S., Qi, W., Wang, Q., Dong, X., Yang, J. * and Luo, X.*(2013). Down-Regulation of OsPDCD5, a Homolog of the Mammalian PDCD5, Increases Rice Tolerance to Salt Stress. Molecular Breeding, 31(2): 333-346.
Yang ,M., Qi, W., Sun, F., Zha, X., Chen, M., Huang, Y., Feng, Y., Yang, J. and Luo, X. *(2013). Overexpression of Rice LRK1, Restricts Internode Elongation by Down-regulating OsKO2. Biotechnology Letters, 35(1): 121-128.
赵斌, 明泓博等(译) (2013).《气候变化生物学》。高等教育出版社。
Zhang, M., Guo, H., Xie, X., Zhang, T., Ouyang, Z., Zhao, B.* (2013). Identification of land-cover characteristics using time series MODIS data: An application in the Yangtze River Estuary. PLoS ONE, 8(7):e70079.
Ouyang, Z., Gao, Y., Xie, X., Guo, H., Zhang, T., Zhao, B.* (2013). Spectral discrimination of the invasive plant Spartina alterniflora at multiple phenological stages in a saltmarsh wetland. PLoS ONE, 8(6):e67315.
谢潇，朱文渤，郭海强，赵斌* (2013). 潮汐与降雨对滨海湿地地下水位的影响。复旦学报, 52(6):13-18.
Tang, L., Gao, Y., Wang, C., Li, B., Chen, J., Zhao, B.* (2013). Habitat heterogeneity influences management efficacy: a case study on controlling invasive Spartina alterniflora. Estuarine Coastal and Shelf Science, 125:20-26.
Scarpina, R., Sigaut, L., Pietrasant, L., McCormick, S., Zheng, B.*, and Muschiettia, J.* (2013). Cajal bodies are developmentally regulated during pollen development and pollen tube growth in Arabidopsis thaliana. Mol. Plant , 6:1355-1357 (co-corresponding author).
Li, X., Zhang, T., Qiao, Q., Ren, Z., Zhao, J., Yonezawa, T., Hasegawa, M., Crabbe, M., Li, J., Zhong,Y.*(2013). Complete Chloroplast Genome Sequence of HoloparasiteCistanchedeserticola (Orobanchaceae) Reveals Gene Loss and Horizontal Gene Transfer from Its Host Haloxylonammodendron (Chenopodiaceae). PloS one, 8:e58747.
Li, Y., RenZMShedlock, A.M., Wu, J., Sang, L., Tersing, T., Hasegawa, M., Yonezawa, T., Zhong, Y.*(2013). High altitude adaptation of the schizothoracine fishes (Cyprinidae) revealed by the mitochondrial genome analyses. Gene, 517:169-78.
Lin, P., Zeng, L., Yang, Z., Liu, R.,Zhong, Y.*（2013）. Development and characterization of polymorphic microsatellite marker for Dactylorhizahatagirea (D. Don) Soo. Conservation Genetics Resources,Online(http://link.springer.com/article/10.1007%2Fs12686-013-0053-z).
Ma, W., Wu, M., Wu, Y., Renm Z.,Zhong, Y.*(2013). Cloning and characterisationf a phenylalanine ammonia-lyase gene from Rhuschinensis. Plant cell reports, 32:1179-90.
Yang, Z., Miao, R., Li, G., Wu, Y., Robson, S., Yang, X., Zhao, Y., Zhao, H.,Zhong, Y.*(2013). Identification of Recurrence Related microRNAs in Hepatocellular Carcinoma after Surgical Resection. International journal of molecular sciences, 14:1105-18.
张体操，乔琴，钟扬* (2013). 青藏高原生物资源开发的现状与前景. 生命科学, 25:446-450.
Zhou, X.*, Fu, Y., Zhou, Y., Li, B., Luo, Y. (2013). An imperative need for global change research in tropical forests. Tree Physiology, 33:903-912.
Zhang, B.*, Cao, J., Bai, Y., Zhou, X.*, Ning, Z., Yang, S., Hu, L. (2013) Effects of rainfall amount and frequency on vegetation growth in a Tibetan alpine meadow. Climatic Change,118(2):197-212.